HL_8CSP_016
3D structure
- PDB id
- 8CSP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial small subunit assembly intermediate (State A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- UACCCCA
- Length
- 7 nucleotides
- Bulged bases
- 8CSP|1|A|C|1377, 8CSP|1|A|C|1378
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8CSP_016 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.1349
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.3
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 5
Unit IDs
8CSP|1|A|U|1373
8CSP|1|A|A|1374
8CSP|1|A|C|1375
8CSP|1|A|C|1376
8CSP|1|A|C|1377
8CSP|1|A|C|1378
8CSP|1|A|A|1379
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 8
- Malonyl-CoA-acyl carrier protein transacylase, mitochondrial
- Chain F
- 28S ribosomal protein S7, mitochondrial
- Chain G
- 28S ribosomal protein S9, mitochondrial
- Chain X
- 28S ribosomal protein S29, mitochondrial
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