HL_8CVM_012

3D structure

PDB id

8CVM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined map

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

UGUGUGUGUCAGGUGUUGCAUGUG

Length

24 nucleotides

Bulged bases

8CVM|1|a|U|289, 8CVM|1|a|G|290

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CVM|1|a|U|283
8CVM|1|a|G|284
8CVM|1|a|U|285
8CVM|1|a|G|286
8CVM|1|a|U|287
8CVM|1|a|G|288
8CVM|1|a|U|289
8CVM|1|a|G|290
8CVM|1|a|U|291
8CVM|1|a|C|301
8CVM|1|a|A|302
8CVM|1|a|G|303
8CVM|1|a|G|304
8CVM|1|a|U|305
8CVM|1|a|G|306
8CVM|1|a|U|307
8CVM|1|a|U|308
8CVM|1|a|G|309
8CVM|1|a|C|310
8CVM|1|a|A|311
8CVM|1|a|U|312
8CVM|1|a|G|313
8CVM|1|a|U|314
8CVM|1|a|G|315

Current chains

Chain a

23S ribosomal RNA

Nearby chains