HL_8CVM_033

3D structure

PDB id

8CVM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined map

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GCUUGGAAGCAGC

Length

13 nucleotides

Bulged bases

8CVM|1|a|G|1150, 8CVM|1|a|A|1153

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CVM|1|a|G|1146
8CVM|1|a|C|1147
8CVM|1|a|U|1148
8CVM|1|a|U|1149
8CVM|1|a|G|1150
8CVM|1|a|G|1151
8CVM|1|a|A|1152
8CVM|1|a|A|1153
8CVM|1|a|G|1154
8CVM|1|a|C|1155
8CVM|1|a|A|1156
8CVM|1|a|G|1157
8CVM|1|a|C|1158

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain l

50S ribosomal protein L16