HL_8CVM_043

3D structure

PDB id

8CVM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined map

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CCAUGGUUGUG

Length

11 nucleotides

Bulged bases

8CVM|1|a|U|1719

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CVM|1|a|C|1713
8CVM|1|a|C|1714
8CVM|1|a|A|1715
8CVM|1|a|U|1716
8CVM|1|a|G|1717
8CVM|1|a|G|1718
8CVM|1|a|U|1719
8CVM|1|a|U|1720
8CVM|1|a|G|1721
8CVM|1|a|U|1722
8CVM|1|a|G|1723

Current chains

Chain a

23S ribosomal RNA

Nearby chains