HL_8CVM_056

3D structure

PDB id

8CVM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined map

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GGACGGUUUUCUGAUUGUUC

Length

20 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CVM|1|a|G|2283
8CVM|1|a|G|2284
8CVM|1|a|A|2285
8CVM|1|a|C|2286
8CVM|1|a|G|2287
8CVM|1|a|G|2288
8CVM|1|a|U|2289
8CVM|1|a|U|2290
8CVM|1|a|U|2291
8CVM|1|a|U|2360
8CVM|1|a|C|2361
8CVM|1|a|U|2362
8CVM|1|a|G|2363
8CVM|1|a|A|2364
8CVM|1|a|U|2365
8CVM|1|a|U|2366
8CVM|1|a|G|2367
8CVM|1|a|U|2368
8CVM|1|a|U|2369
8CVM|1|a|C|2370

Current chains

Chain a

23S ribosomal RNA

Nearby chains