HL_8E5T_007

3D structure

PDB id

8E5T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GUAAAUUCC

Length

9 nucleotides

Bulged bases

8E5T|1|1|A|307, 8E5T|1|1|U|309

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E5T|1|1|G|304
8E5T|1|1|U|305
8E5T|1|1|A|306
8E5T|1|1|A|307
8E5T|1|1|A|308
8E5T|1|1|U|309
8E5T|1|1|U|310
8E5T|1|1|C|311
8E5T|1|1|C|312

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain b

Ribosome biogenesis protein BRX1

Chain p

ATP-dependent RNA helicase HAS1