HL_8E5T_017
3D structure
- PDB id
- 8E5T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UUGAUAUGAUG
- Length
- 11 nucleotides
- Bulged bases
- 8E5T|1|1|G|1349, 8E5T|1|1|A|1352, 8E5T|1|1|U|1356
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8E5T|1|1|U|1347
8E5T|1|1|U|1348
8E5T|1|1|G|1349
8E5T|1|1|A|1350
8E5T|1|1|U|1351
8E5T|1|1|A|1352
8E5T|1|1|U|1353
8E5T|1|1|G|1354
8E5T|1|1|A|1355
8E5T|1|1|U|1356
8E5T|1|1|G|1357
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain D
- Protein MAK16
- Chain E
- 60S ribosomal protein L6-A
- Chain F
- 60S ribosomal protein L7-A
- Chain Q
- 60S ribosomal protein L18-A
- Chain e
- 60S ribosomal protein L32
- Chain z
- Ribosomal RNA-processing protein 1
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