HL_8EIU_085

3D structure

PDB id

8EIU (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with A-loop mutations U2554C and U2555C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.24 Å

Loop

Sequence

GUAAUCC

Length

7 nucleotides

Bulged bases

8EIU|1|a|A|2211, 8EIU|1|a|U|2213

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8EIU_085 not in the Motif Atlas

Homologous match to HL_5J7L_185

Geometric discrepancy: 0.0675

The information below is about HL_5J7L_185

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

8EIU|1|a|G|2209
8EIU|1|a|U|2210
8EIU|1|a|A|2211
8EIU|1|a|A|2212
8EIU|1|a|U|2213
8EIU|1|a|C|2214
8EIU|1|a|C|2215

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L2