HL_8EIU_095

3D structure

PDB id

8EIU (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with A-loop mutations U2554C and U2555C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.24 Å

Loop

Sequence

C(OMU)GCCCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8EIU_095 not in the Motif Atlas

Homologous match to HL_7RQB_062

Geometric discrepancy: 0.092

The information below is about HL_7RQB_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EIU|1|a|C|2551
8EIU|1|a|OMU|2552
8EIU|1|a|G|2553
8EIU|1|a|C|2554
8EIU|1|a|C|2555
8EIU|1|a|C|2556
8EIU|1|a|G|2557

Current chains

Chain a

23S rRNA

Nearby chains

Chain Y

Transfer RNA; tRNA