HL_8ETI_016

3D structure

PDB id

8ETI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Fkbp39 associated 60S nascent ribosome State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAGUAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ETI_016 not in the Motif Atlas

Geometric match to HL_2Y9H_003

Geometric discrepancy: 0.1509

The information below is about HL_2Y9H_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

8ETI|1|1|G|1023
8ETI|1|1|A|1024
8ETI|1|1|G|1025
8ETI|1|1|U|1088
8ETI|1|1|A|1089
8ETI|1|1|U|1090

Current chains

Chain 1

RNA (1564-MER)

Nearby chains

Chain S

60S ribosomal protein L20-A