HL_8ETI_017

3D structure

PDB id

8ETI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Fkbp39 associated 60S nascent ribosome State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGUAAGC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ETI_017 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.2445

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

8ETI|1|1|G|1157
8ETI|1|1|G|1158
8ETI|1|1|U|1159
8ETI|1|1|A|1160
8ETI|1|1|A|1161
8ETI|1|1|G|1162
8ETI|1|1|C|1163

Current chains

Chain 1

RNA (1564-MER)

Nearby chains

Chain b

Probable nucleolar GTP-binding protein 1

Chain r

Ribosome biogenesis protein nsa2