HL_8ETI_027
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUGAACGCCUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 8ETI|1|1|G|3212
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ETI_027 not in the Motif Atlas
- Homologous match to HL_8C3A_068
- Geometric discrepancy: 0.1307
- The information below is about HL_8C3A_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56677.9
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
8ETI|1|1|C|3206
8ETI|1|1|U|3207
8ETI|1|1|G|3208
8ETI|1|1|A|3209
8ETI|1|1|A|3210
8ETI|1|1|C|3211
8ETI|1|1|G|3212
8ETI|1|1|C|3213
8ETI|1|1|C|3214
8ETI|1|1|U|3215
8ETI|1|1|C|3216
8ETI|1|1|U|3217
8ETI|1|1|A|3218
8ETI|1|1|A|3219
8ETI|1|1|G|3220
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain H
- 60S ribosomal protein L9-A
- Chain O
- 60S ribosomal protein L16-B
- Chain r
- Ribosome biogenesis protein nsa2
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