HL_8ETI_030

3D structure

PDB id

8ETI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Fkbp39 associated 60S nascent ribosome State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCAUACGAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ETI_030 not in the Motif Atlas

Homologous match to HL_8C3A_071

Geometric discrepancy: 0.186

The information below is about HL_8C3A_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.4

Basepair signature

cWW-cSW-F-F-F-cWW

Number of instances in this motif group

9

Unit IDs

8ETI|1|1|G|3404
8ETI|1|1|C|3405
8ETI|1|1|A|3406
8ETI|1|1|U|3407
8ETI|1|1|A|3408
8ETI|1|1|C|3409
8ETI|1|1|G|3410
8ETI|1|1|A|3411
8ETI|1|1|C|3412

Current chains

Chain 1

RNA (1564-MER)

Nearby chains

Chain B

60S ribosomal protein L3-A

Chain P

60S ribosomal protein L17-A