HL_8ETI_033

3D structure

PDB id

8ETI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Fkbp39 associated 60S nascent ribosome State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CACAUUG

Length

7 nucleotides

Bulged bases

8ETI|1|2|A|119

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ETI_033 not in the Motif Atlas

Geometric match to HL_4WF9_011

Geometric discrepancy: 0.2022

The information below is about HL_4WF9_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

8ETI|1|2|C|116
8ETI|1|2|A|117
8ETI|1|2|C|118
8ETI|1|2|A|119
8ETI|1|2|U|120
8ETI|1|2|U|121
8ETI|1|2|G|122

Current chains

Chain 2

RNA (152-MER)

Nearby chains

Chain X

60S ribosomal protein L25-A

Chain j

60S ribosomal protein L37-B