HL_8EV6_032
3D structure
- PDB id
- 8EV6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.946 Å
Loop
- Sequence
- GUGAGAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8EV6_032 not in the Motif Atlas
- Homologous match to HL_7RQB_033
- Geometric discrepancy: 0.0613
- The information below is about HL_7RQB_033
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41998.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 69
Unit IDs
8EV6|1|1A|G|1327
8EV6|1|1A|U|1328
8EV6|1|1A|G|1329
8EV6|1|1A|A|1330
8EV6|1|1A|G|1331
8EV6|1|1A|A|1332
8EV6|1|1A|A|1333
8EV6|1|1A|U|1334
8EV6|1|1A|C|1335
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 15
- 50S ribosomal protein L32
- Chain 1R
- 50S ribosomal protein L17
- Chain 1W
- 50S ribosomal protein L22
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