HL_8EV7_164

3D structure

PDB id

8EV7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

2.89 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

8EV7|1|2A|A|2268, 8EV7|1|2A|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8EV7_164 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0728

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

8EV7|1|2A|C|2264
8EV7|1|2A|U|2265
8EV7|1|2A|A|2266
8EV7|1|2A|A|2267
8EV7|1|2A|A|2268
8EV7|1|2A|A|2269
8EV7|1|2A|G|2270
8EV7|1|2A|G|2271
8EV7|1|2A|U|2272
8EV7|1|2A|A|2273
8EV7|1|2A|A|2274
8EV7|1|2A|C|2275
8EV7|1|2A|G|2276

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 20

50S ribosomal protein L27

Chain 2Q

50S ribosomal protein L16