HL_8EVQ_048
3D structure
- PDB id
- 8EVQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- A(A2M)GAAAUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8EVQ_048 not in the Motif Atlas
- Geometric match to HL_4WF9_041
- Geometric discrepancy: 0.3153
- The information below is about HL_4WF9_041
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_65167.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
8EVQ|1|A1|A|2219
8EVQ|1|A1|A2M|2220
8EVQ|1|A1|G|2221
8EVQ|1|A1|A|2222
8EVQ|1|A1|A|2223
8EVQ|1|A1|A|2224
8EVQ|1|A1|U|2225
8EVQ|1|A1|U|2226
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain Ai
- 60S ribosomal protein L36-A
- Chain Ao
- 60S ribosomal protein L42-A
Coloring options: