#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 81-82-73-53-6
1 HL_2ZNI_0022ZNI0.75771 Cbacterial tRNAA31C32U33U35A36A37A38U39cWWcWWntSH
2 HL_7PMQ_0037PMQ0.65820 FRNA (42-MER)G8U9U10U11C12G13A14C15cWWntSH
3 HL_3W3S_0023W3S0.54781tRNA anticodon loopBSelenocysteine transfer RNAA31C32U33C35A36A37A38U39cWW
4 HL_8VTW_0568VTW0.42260 1A LSU rRNAC2355C2356U2357G2358C2359A2360A2361G2362cWWntSH
5 HL_4WF9_0534WF90.47700 X LSU rRNAC2382C2383U2384A2385C2386A2387A2388G2389cWW
6 HL_7A0S_0567A0S0.42270 X LSU rRNAC2334U2335G2336A2337C2338A2339C2340G2341cWWntSHtSH
7 HL_8KAL_0018KAL0.61890 ARNA (98-MER)U31A32G33A34A35A36U37A38cWWncWWntSH
8 HL_3RG5_0063RG50.54671 BSelenocysteine transfer RNAG31C32U33C35A36A37A38C39cWWcWWntSH
9 HL_7QR8_0037QR80.54950 APTPRC sgRNAU71U72G73A74A75A76A77A78cWWncWHtSH
10 HL_4V9F_0324V9F0.61861 0 LSU rRNAA1274C1275U1276C1277A1278A1280C1281U1282cWWtSHntSH
11 HL_5UD5_0025UD50.58001 C tRNAA31C32U33C34A36A37A38U39cWWntSH
12 HL_2D6F_0052D6F0.52191 FtRNAG931C932U933U934G936G937A938C939cWWcWW
13 HL_1J2B_0011J2B0.51761 CtRNA(Val)C932C933U934A936C937G938A939G940cWWcWWntSH
14 HL_4WF9_0414WF90.46700 X LSU rRNAG1761U1762U1763A1764A1765C1766G1767C1768cWWncWWntSS
15 HL_4JXZ_0024JXZ0.15591 BRNA (71-MER)U931U932U933U934U935A937U938A939cWWncWWntSH
16 HL_1QTQ_0021QTQ0.00001 B tRNAA931U932U933C934U935A937U938U939cWWncWWntSH

3D structures

Complete motif including flanking bases
SequenceCounts
ACUCUAAAU2
GUUUCGAC1
ACUUCAAAU1
CCUGCAAG1
CCUACAAG1
CUGACACG1
UAGAAAUA1
GCUUCAAAC1
UUGAAAAA1
ACUCAUACU1
GCUUUGGAC1
CCUUACGAG1
GUUAACGC1
UUUUUGAUA1
AUUCUGAUU1
Non-Watson-Crick part of the motif
SequenceCounts
CUCUAAA2
CUUCAAA2
UUUCGA1
CUGCAA1
CUACAA1
UGACAC1
AGAAAU1
UGAAAA1
CUCAUAC1
CUUUGGA1
CUUACGA1
UUAACG1
UUUUGAU1
UUCUGAU1

Release history

Release3.87
Date2024-08-14
StatusNew id, > 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • tRNA anticodon loop (1)
  • Basepair signature
    cWW-F-F-F-F-F-F
    Heat map statistics
    Min 0.11 | Avg 0.44 | Max 0.76
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