HL_8EVT_045
3D structure
- PDB id
- 8EVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) refined against a composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GGUAC
- Length
- 5 nucleotides
- Bulged bases
- 8EVT|1|A1|G|2111
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8EVT_045 not in the Motif Atlas
- Homologous match to HL_5TBW_045
- Geometric discrepancy: 0.1133
- The information below is about HL_5TBW_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_55195.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 6
Unit IDs
8EVT|1|A1|G|2110
8EVT|1|A1|G|2111
8EVT|1|A1|U|2112
8EVT|1|A1|A|2113
8EVT|1|A1|C|2114
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AR
- 60S ribosomal protein L19-A
- Chain AW
- RPL24A isoform 1
Coloring options: