HL_8EYQ_003

3D structure

PDB id

8EYQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S_delta_ksgA_h44_inactive_conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8EYQ_003 not in the Motif Atlas

Homologous match to HL_5J7L_003

Geometric discrepancy: 0.1303

The information below is about HL_5J7L_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

8EYQ|1|A|G|158
8EYQ|1|A|G|159
8EYQ|1|A|A|160
8EYQ|1|A|A|161
8EYQ|1|A|A|162
8EYQ|1|A|C|163

Current chains

Chain A

16S_rRNA

Nearby chains

Chain T

30S ribosomal protein S20