HL_8EYQ_023

3D structure

PDB id

8EYQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S_delta_ksgA_h44_inactive_conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

8EYQ|1|A|U|1030

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8EYQ_023 not in the Motif Atlas

Geometric match to HL_5H9F_001

Geometric discrepancy: 0.3462

The information below is about HL_5H9F_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87553.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

8EYQ|1|A|C|1027
8EYQ|1|A|C|1028
8EYQ|1|A|U|1029
8EYQ|1|A|U|1030
8EYQ|1|A|C|1031
8EYQ|1|A|G|1032
8EYQ|1|A|G|1033
8EYQ|1|A|G|1034

Current chains

Chain A

16S_rRNA

Nearby chains