3D structure

PDB id
8EYQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S_delta_ksgA_h44_inactive_conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GUUAAGUC
Length
8 nucleotides
Bulged bases
8EYQ|1|A|G|1094
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8EYQ_025 not in the Motif Atlas
Homologous match to HL_4LFB_025
Geometric discrepancy: 0.1799
The information below is about HL_4LFB_025
Detailed Annotation
T-loop related
Broad Annotation
T-loop
Motif group
HL_77436.5
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
23

Unit IDs

8EYQ|1|A|G|1089
8EYQ|1|A|U|1090
8EYQ|1|A|U|1091
8EYQ|1|A|A|1092
8EYQ|1|A|A|1093
8EYQ|1|A|G|1094
8EYQ|1|A|U|1095
8EYQ|1|A|C|1096

Current chains

Chain A
16S_rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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