3D structure

PDB id
8EYT (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S_delta_ksgA+KsgA complex
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
UUCAGAGAUGAG
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8EYT_022 not in the Motif Atlas
Homologous match to HL_5J7L_216
Geometric discrepancy: 0.438
The information below is about HL_5J7L_216
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_78284.1
Basepair signature
cWW-F-F-F-F-F-F-F-F-F-F
Number of instances in this motif group
2

Unit IDs

8EYT|1|A|U|1009
8EYT|1|A|U|1010
8EYT|1|A|C|1011
8EYT|1|A|A|1012
8EYT|1|A|G|1013
8EYT|1|A|A|1014
8EYT|1|A|G|1015
8EYT|1|A|A|1016
8EYT|1|A|U|1017
8EYT|1|A|G|1018
8EYT|1|A|A|1019
8EYT|1|A|G|1020

Current chains

Chain A
16S rRNA

Nearby chains

Chain N
30S ribosomal protein S14
Chain S
30S ribosomal protein S19

Coloring options:


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