HL_8EYT_031

3D structure

PDB id

8EYT (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S_delta_ksgA+KsgA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGGAAC

Length

6 nucleotides

Bulged bases

8EYT|1|A|G|1516, 8EYT|1|A|G|1517, 8EYT|1|A|A|1519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8EYT_031 not in the Motif Atlas

Geometric match to HL_6AAX_001

Geometric discrepancy: 0.3166

The information below is about HL_6AAX_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_56334.1

Basepair signature

cWW-F

Number of instances in this motif group

16

Unit IDs

8EYT|1|A|G|1515
8EYT|1|A|G|1516
8EYT|1|A|G|1517
8EYT|1|A|A|1518
8EYT|1|A|A|1519
8EYT|1|A|C|1520

Current chains

Chain A

16S rRNA

Nearby chains

Chain W

Ribosomal RNA small subunit methyltransferase A