HL_8FC3_156

3D structure

PDB id

8FC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

8FC3|1|2A|A|2268, 8FC3|1|2A|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FC3_156 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0512

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

8FC3|1|2A|C|2264
8FC3|1|2A|U|2265
8FC3|1|2A|A|2266
8FC3|1|2A|A|2267
8FC3|1|2A|A|2268
8FC3|1|2A|A|2269
8FC3|1|2A|G|2270
8FC3|1|2A|G|2271
8FC3|1|2A|U|2272
8FC3|1|2A|A|2273
8FC3|1|2A|A|2274
8FC3|1|2A|C|2275
8FC3|1|2A|G|2276

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 20

50S ribosomal protein L27

Chain 2Q

50S ribosomal protein L16

Chain 2Z

50S ribosomal protein L25