HL_8FIZ_021
3D structure
- PDB id
- 8FIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAUGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 8FIZ|1|AA|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FIZ_021 not in the Motif Atlas
- Homologous match to HL_5J7L_021
- Geometric discrepancy: 0.1349
- The information below is about HL_5J7L_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8FIZ|1|AA|G|963
8FIZ|1|AA|A|964
8FIZ|1|AA|U|965
8FIZ|1|AA|G|966
8FIZ|1|AA|C|967
8FIZ|1|AA|A|968
8FIZ|1|AA|A|969
8FIZ|1|AA|C|970
8FIZ|1|AA|G|971
8FIZ|1|AA|C|972
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AE
- 30S ribosomal protein S13
- Chain AH
- 30S ribosomal protein S10
- Chain AK
- 30S ribosomal protein S9
- Chain BB
- Transfer RNA; tRNA
Coloring options: