HL_8FIZ_027

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FIZ_027 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3843

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

8FIZ|1|AA|C|1265
8FIZ|1|AA|G|1266
8FIZ|1|AA|C|1267
8FIZ|1|AA|G|1268
8FIZ|1|AA|A|1269
8FIZ|1|AA|G|1270

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AD

30S ribosomal protein S19