HL_8FIZ_047

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCUUAGGC

Length

8 nucleotides

Bulged bases

8FIZ|1|BA|G|549

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FIZ_047 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3485

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

8FIZ|1|BA|G|543
8FIZ|1|BA|C|544
8FIZ|1|BA|U|545
8FIZ|1|BA|U|546
8FIZ|1|BA|A|547
8FIZ|1|BA|G|548
8FIZ|1|BA|G|549
8FIZ|1|BA|C|550

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BY

Ribosomal protein L21