HL_8FIZ_091

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGAAGUAG

Length

8 nucleotides

Bulged bases

8FIZ|1|BA|G|2529, 8FIZ|1|BA|A|2531

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FIZ_091 not in the Motif Atlas

Homologous match to HL_7RQB_061

Geometric discrepancy: 0.5433

The information below is about HL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91104.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

8FIZ|1|BA|U|2528
8FIZ|1|BA|G|2529
8FIZ|1|BA|A|2530
8FIZ|1|BA|A|2531
8FIZ|1|BA|G|2532
8FIZ|1|BA|U|2533
8FIZ|1|BA|A|2534
8FIZ|1|BA|G|2535

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BJ

50S ribosomal protein L6

Chain BP

50S ribosomal protein L36