HL_8FKZ_053

3D structure

PDB id

8FKZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State G)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

AAGCAGAAUU

Length

10 nucleotides

Bulged bases

8FKZ|1|L3|G|4475

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKZ|1|L3|A|4473
8FKZ|1|L3|A|4474
8FKZ|1|L3|G|4475
8FKZ|1|L3|C|4476
8FKZ|1|L3|A|4477
8FKZ|1|L3|G|4478
8FKZ|1|L3|A|4479
8FKZ|1|L3|A|4480
8FKZ|1|L3|U|4481
8FKZ|1|L3|U|4482

Current chains

Chain L3

28S rRNA

Nearby chains

Chain NF

Ribosome biogenesis protein NSA2 homolog

Chain SG

60S ribosomal protein L9

Chain SR

GTP-binding protein 4