HL_8FL0_008

3D structure

PDB id

8FL0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State H)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GGAUGAAC

Length

8 nucleotides

Bulged bases

8FL0|1|L3|A|1891

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FL0_008 not in the Motif Atlas

Geometric match to HL_2A43_001

Geometric discrepancy: 0.3779

The information below is about HL_2A43_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86621.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

8FL0|1|L3|G|1886
8FL0|1|L3|G|1887
8FL0|1|L3|A|1888
8FL0|1|L3|U|1889
8FL0|1|L3|G|1890
8FL0|1|L3|A|1891
8FL0|1|L3|A|1892
8FL0|1|L3|C|1893

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LT

60S ribosomal protein L35a

Chain NB

Guanine nucleotide-binding protein-like 3