HL_8FL0_015
3D structure
- PDB id
- 8FL0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nucleolar pre-60S ribosomal subunit (State H)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.91 Å
Loop
- Sequence
- UGUACG
- Length
- 6 nucleotides
- Bulged bases
- 8FL0|1|L3|G|4305, 8FL0|1|L3|U|4306, 8FL0|1|L3|C|4308
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FL0_015 not in the Motif Atlas
- Geometric match to HL_4TUW_002
- Geometric discrepancy: 0.3602
- The information below is about HL_4TUW_002
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_12626.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 17
Unit IDs
8FL0|1|L3|U|4301
8FL0|1|L3|G|4305
8FL0|1|L3|U|4306
8FL0|1|L3|A|4307
8FL0|1|L3|C|4308
8FL0|1|L3|G|4309
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain NC
- Nucleolar GTP-binding protein 2
- Chain ND
- Ribosome production factor 2 homolog
- Chain NF
- Ribosome biogenesis protein NSA2 homolog
- Chain ST
- Ribosome biogenesis regulatory protein homolog
Coloring options: