HL_8FL2_050

3D structure

PDB id

8FL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

CUUC(OMG)G

Length

6 nucleotides

Bulged bases

8FL2|1|L3|U|2874

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FL2_050 not in the Motif Atlas

Homologous match to HL_8C3A_043

Geometric discrepancy: 0.1065

The information below is about HL_8C3A_043

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

8FL2|1|L3|C|2872
8FL2|1|L3|U|2873
8FL2|1|L3|U|2874
8FL2|1|L3|C|2875
8FL2|1|L3|OMG|2876
8FL2|1|L3|G|2877

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LX

60S ribosomal protein L37a

Chain NC

Nucleolar GTP-binding protein 2