HL_8FL3_018

3D structure

PDB id

8FL3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

C(OMG)UCUUG(1MA)AAC(A2M)CG

Length

14 nucleotides

Bulged bases

8FL3|1|L3|U|1320

QA status

Modified nucleotides: OMG, 1MA, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL3|1|L3|C|1315
8FL3|1|L3|OMG|1316
8FL3|1|L3|U|1317
8FL3|1|L3|C|1318
8FL3|1|L3|U|1319
8FL3|1|L3|U|1320
8FL3|1|L3|G|1321
8FL3|1|L3|1MA|1322
8FL3|1|L3|A|1323
8FL3|1|L3|A|1324
8FL3|1|L3|C|1325
8FL3|1|L3|A2M|1326
8FL3|1|L3|C|1327
8FL3|1|L3|G|1328

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LK

60S ribosomal protein L27a

Chain LQ

60S ribosomal protein L32

Chain NC

Nucleolar GTP-binding protein 2

Chain SA

60S ribosomal protein L4