HL_8FL3_058
3D structure
- PDB id
- 8FL3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State I2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.53 Å
Loop
- Sequence
- UCAAACGGUA(6MZ)CG
- Length
- 13 nucleotides
- Bulged bases
- 8FL3|1|L3|A|4213, 8FL3|1|L3|C|4221
- QA status
- Modified nucleotides: 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FL3_058 not in the Motif Atlas
- Geometric match to HL_8SP9_002
- Geometric discrepancy: 0.3612
- The information below is about HL_8SP9_002
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_12626.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 17
Unit IDs
8FL3|1|L3|U|4210
8FL3|1|L3|C|4211
8FL3|1|L3|A|4212
8FL3|1|L3|A|4213
8FL3|1|L3|A|4214
8FL3|1|L3|C|4215
8FL3|1|L3|G|4216
8FL3|1|L3|G|4217
8FL3|1|L3|U|4218
8FL3|1|L3|A|4219
8FL3|1|L3|6MZ|4220
8FL3|1|L3|C|4221
8FL3|1|L3|G|4222
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain NC
- Nucleolar GTP-binding protein 2
- Chain NF
- Ribosome biogenesis protein NSA2 homolog
- Chain NT
- Protein SDA1 homolog
- Chain NU
- Testis-expressed protein 10
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