HL_8FL9_017

3D structure

PDB id

8FL9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State J3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CGGACUGUCCCCAGUGCG

Length

18 nucleotides

Bulged bases

8FL9|1|L3|G|1178, 8FL9|1|L3|C|1181

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL9|1|L3|C|1172
8FL9|1|L3|G|1173
8FL9|1|L3|G|1174
8FL9|1|L3|A|1175
8FL9|1|L3|C|1176
8FL9|1|L3|U|1177
8FL9|1|L3|G|1178
8FL9|1|L3|U|1179
8FL9|1|L3|C|1180
8FL9|1|L3|C|1181
8FL9|1|L3|C|1182
8FL9|1|L3|C|1183
8FL9|1|L3|A|1184
8FL9|1|L3|G|1185
8FL9|1|L3|U|1186
8FL9|1|L3|G|1187
8FL9|1|L3|C|1188
8FL9|1|L3|G|1189

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L4

5S ribosomal RNA; 5S rRNA

Chain SB

60S ribosomal protein L5