HL_8FL9_022
3D structure
- PDB id
- 8FL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GCCUCUCCAGUCCGC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FL9_022 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.2368
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8FL9|1|L3|G|1435
8FL9|1|L3|C|1436
8FL9|1|L3|C|1437
8FL9|1|L3|U|1438
8FL9|1|L3|C|1439
8FL9|1|L3|U|1440
8FL9|1|L3|C|1441
8FL9|1|L3|C|1442
8FL9|1|L3|A|1443
8FL9|1|L3|G|1444
8FL9|1|L3|U|1445
8FL9|1|L3|C|1446
8FL9|1|L3|C|1447
8FL9|1|L3|G|1448
8FL9|1|L3|C|1449
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L18
- Chain LM
- 60S ribosomal protein L29
- Chain SA
- 60S ribosomal protein L4
- Chain SD
- 60S ribosomal protein L7
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