HL_8FL9_049
3D structure
- PDB id
- 8FL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GGUGC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FL9_049 not in the Motif Atlas
- Geometric match to HL_6U8D_003
- Geometric discrepancy: 0.2294
- The information below is about HL_6U8D_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_32346.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 10
Unit IDs
8FL9|1|L3|G|3614
8FL9|1|L3|G|3615
8FL9|1|L3|U|3616
8FL9|1|L3|G|3617
8FL9|1|L3|C|3618
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LD
- 60S ribosomal protein L19
- Chain NP
- Zinc finger protein 593
- Chain SV
- Probable ribosome biogenesis protein RLP24
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