HL_8FL9_076

3D structure

PDB id

8FL9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State J3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

UCGCACGAAA

Length

10 nucleotides

Bulged bases

8FL9|1|L3|C|1365, 8FL9|1|L3|A|1371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL9|1|L3|U|1364
8FL9|1|L3|C|1365
8FL9|1|L3|G|1366
8FL9|1|L3|C|1367
8FL9|1|L3|A|1368
8FL9|1|L3|C|1369
8FL9|1|L3|G|1370
8FL9|1|L3|A|1371
8FL9|1|L3|A|1372
8FL9|1|L3|A|1373

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L1

5.8S ribosomal RNA; 5.8S rRNA

Chain L6

60S ribosomal protein L13

Chain L9

60S ribosomal protein L15

Chain LI

60S ribosomal protein L26

Chain SA

60S ribosomal protein L4