HL_8FLA_040

3D structure

PDB id

8FLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

CCG

Length

3 nucleotides

Bulged bases

8FLA|1|L3|C|2470

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FLA_040 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3839

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

8FLA|1|L3|C|2469
8FLA|1|L3|C|2470
8FLA|1|L3|G|2471

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L9

60S ribosomal protein L15

Chain LH

60S ribosomal protein L23a

Chain SE

60S ribosomal protein L7a