HL_8FLC_052

3D structure

PDB id

8FLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

G(PSU)UUAAUUAAAAC

Length

13 nucleotides

Bulged bases

8FLC|1|L3|A|3642, 8FLC|1|L3|A|3643, 8FLC|1|L3|U|3644, 8FLC|1|L3|A|3648

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLC|1|L3|G|3638
8FLC|1|L3|PSU|3639
8FLC|1|L3|U|3640
8FLC|1|L3|U|3641
8FLC|1|L3|A|3642
8FLC|1|L3|A|3643
8FLC|1|L3|U|3644
8FLC|1|L3|U|3645
8FLC|1|L3|A|3646
8FLC|1|L3|A|3647
8FLC|1|L3|A|3648
8FLC|1|L3|A|3649
8FLC|1|L3|C|3650

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LW

60S ribosomal protein L37

Chain SF

60S ribosomal protein L8

Chain SR

GTP-binding protein 4