HL_8FLC_076
3D structure
- PDB id
- 8FLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State K3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GGAGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FLC_076 not in the Motif Atlas
- Homologous match to HL_5TBW_186
- Geometric discrepancy: 0.111
- The information below is about HL_5TBW_186
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
8FLC|1|L4|G|86
8FLC|1|L4|G|87
8FLC|1|L4|A|88
8FLC|1|L4|G|89
8FLC|1|L4|A|90
8FLC|1|L4|C|91
Current chains
- Chain L4
- 5S rRNA
Nearby chains
- Chain L3
- Large subunit ribosomal RNA; LSU rRNA
- Chain LC
- 60S ribosomal protein L18a
- Chain NR
- Translation machinery-associated protein 16
- Chain VB
- Leydig cell tumor 10 kDa protein homolog
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