HL_8FLD_020
3D structure
- PDB id
- 8FLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State L1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.58 Å
Loop
- Sequence
- C(OMG)UCUUG(1MA)AAC(A2M)CG
- Length
- 14 nucleotides
- Bulged bases
- 8FLD|1|L3|A|1323
- QA status
- Modified nucleotides: OMG, 1MA, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FLD_020 not in the Motif Atlas
- Geometric match to HL_5TBW_226
- Geometric discrepancy: 0.335
- The information below is about HL_5TBW_226
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59342.2
- Basepair signature
- cWW-F-F-F-F-cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
8FLD|1|L3|C|1315
8FLD|1|L3|OMG|1316
8FLD|1|L3|U|1317
8FLD|1|L3|C|1318
8FLD|1|L3|U|1319
8FLD|1|L3|U|1320
8FLD|1|L3|G|1321
8FLD|1|L3|1MA|1322
8FLD|1|L3|A|1323
8FLD|1|L3|A|1324
8FLD|1|L3|C|1325
8FLD|1|L3|A2M|1326
8FLD|1|L3|C|1327
8FLD|1|L3|G|1328
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LK
- 60S ribosomal protein L27a
- Chain LQ
- 60S ribosomal protein L32
- Chain SA
- 60S ribosomal protein L4
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