HL_8FOM_116

3D structure

PDB id

8FOM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.58 Å

Loop

Sequence

UACGG

Length

5 nucleotides

Bulged bases

8FOM|1|XA|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FOM_116 not in the Motif Atlas

Geometric match to HL_5TBW_044

Geometric discrepancy: 0.3441

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

8FOM|1|XA|U|343
8FOM|1|XA|A|344
8FOM|1|XA|C|345
8FOM|1|XA|G|346
8FOM|1|XA|G|347

Current chains

Chain XA

16S rRNA

Nearby chains

Chain YO

50S ribosomal protein L14

Chain YT

50S ribosomal protein L19