HL_8FOM_144
3D structure
- PDB id
- 8FOM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.58 Å
Loop
- Sequence
- UGGCUACCUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FOM_144 not in the Motif Atlas
- Homologous match to HL_7RQB_001
- Geometric discrepancy: 0.0951
- The information below is about HL_7RQB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_99167.2
- Basepair signature
- cWW-F-F-cSH-F-F
- Number of instances in this motif group
- 6
Unit IDs
8FOM|1|YA|U|59
8FOM|1|YA|G|60
8FOM|1|YA|G|61
8FOM|1|YA|C|62
8FOM|1|YA|U|63
8FOM|1|YA|A|64
8FOM|1|YA|C|65
8FOM|1|YA|C|66
8FOM|1|YA|U|67
8FOM|1|YA|G|68
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y2
- 50S ribosomal protein L29
- Chain Y7
- 50S ribosomal protein L34
- Chain YX
- 50S ribosomal protein L23
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