HL_8FON_023

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

8FON|1|QA|G|1029

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FON_023 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3165

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

8FON|1|QA|C|1028|||B
8FON|1|QA|G|1029
8FON|1|QA|C|1030
8FON|1|QA|G|1031
8FON|1|QA|A|1032
8FON|1|QA|G|1032|||A

Current chains

Chain QA

16S rRNA

Nearby chains

Chain YA

Large subunit ribosomal RNA; LSU rRNA