HL_8FON_187

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

UGAUGAG

Length

7 nucleotides

Bulged bases

8FON|1|YA|U|1730

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FON_187 not in the Motif Atlas

Homologous match to HL_7RQB_043

Geometric discrepancy: 0.3337

The information below is about HL_7RQB_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43656.2

Basepair signature

cWW-tSH

Number of instances in this motif group

8

Unit IDs

8FON|1|YA|U|1727
8FON|1|YA|G|1728
8FON|1|YA|A|1729
8FON|1|YA|U|1730
8FON|1|YA|G|1731
8FON|1|YA|A|1732
8FON|1|YA|G|1733

Current chains

Chain YA

23S rRNA

Nearby chains