HL_8FR8_024
3D structure
- PDB id
- 8FR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GGUAAGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FR8_024 not in the Motif Atlas
- Homologous match to HL_7RQB_022
- Geometric discrepancy: 0.1157
- The information below is about HL_7RQB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84085.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
8FR8|1|A|G|827
8FR8|1|A|G|828
8FR8|1|A|U|829
8FR8|1|A|A|830
8FR8|1|A|A|831
8FR8|1|A|G|832
8FR8|1|A|A|833
8FR8|1|A|C|834
Current chains
- Chain A
- 23S rRNA (3119-MER)
Nearby chains
- Chain K
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain p
- 30S ribosomal protein S15
Coloring options: