HL_8FR8_051

3D structure

PDB id

8FR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

8FR8|1|A|U|2092

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FR8_051 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.2532

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

8FR8|1|A|C|2089
8FR8|1|A|U|2090
8FR8|1|A|U|2091
8FR8|1|A|U|2092
8FR8|1|A|G|2093

Current chains

Chain A

23S rRNA (3119-MER)

Nearby chains