HL_8FR8_095
3D structure
- PDB id
- 8FR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 8FR8|1|a|U|773
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FR8_095 not in the Motif Atlas
- Homologous match to HL_4LFB_017
- Geometric discrepancy: 0.1177
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
8FR8|1|a|G|766
8FR8|1|a|A|767
8FR8|1|a|U|768
8FR8|1|a|U|769
8FR8|1|a|A|770
8FR8|1|a|G|771
8FR8|1|a|A|772
8FR8|1|a|U|773
8FR8|1|a|A|774
8FR8|1|a|C|775
8FR8|1|a|C|776
Current chains
- Chain a
- 16S rRNA (1511-MER)
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain E
- Transfer RNA; tRNA
- Chain m
- 30S ribosomal protein S11
- Chain v
- mRNA
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